SMTL ID : 3ry7.1

Crystal Structure of Sa239

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.15 Å

Oligo State

homo-dimer

Ligands

6 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 8 residues within 4Å: Chain A: N.12, D.14, G.40, G.41, K.42, N.45, A.97, E.142 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:N.12, A:G.41, A:K.42, A:N.45, A:E.142 Water bridges: A:D.14, A:N.45 GOL.2: 4 residues within 4Å: Chain A: I.86, I.87, K.88 Ligands: GOL.3 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.88, A:K.88 GOL.3: 1 residues within 4Å: Ligands: GOL.2 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.84 GOL.4: 8 residues within 4Å: Chain B: N.12, D.14, G.40, G.41, K.42, N.45, A.97, E.142 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:N.12, B:G.41, B:K.42, B:N.45, B:E.142 Water bridges: B:D.14, B:N.45 GOL.5: 4 residues within 4Å: Chain B: I.86, I.87, K.88 Ligands: GOL.6 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:K.88, B:K.88 GOL.6: 1 residues within 4Å: Ligands: GOL.5 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:S.84

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, J. et al., Crystal structure of Sa239 reveals the structural basis for the activation of ribokinase by monovalent cations. J.Struct.Biol. (2012)

Release Date

2012-04-25

Peptides

Ribokinase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Ribokinase