SMTL ID : 3ryo.2 (1 other biounit)

Crystal Structure of Enhanced Intracellular Survival (Eis) Protein from Mycobacterium tuberculosis with Acetyl CoA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

homo-hexamer

Ligands

6 x ACO: ACETYL COENZYME *A(Non-covalent)

ACO.1: 22 residues within 4Å: Chain A: S.49, F.50, S.109, F.110, V.111, A.112, V.113, R.118, R.119, R.120, G.121, L.122, L.123, R.124, H.145, S.147, E.148, G.150, I.151, Y.152, R.154 Chain F: D.286 21 PLIP interactions: 20 interactions with chain A, 1 interactions with chain F Hydrophobic interactions: A:F.50, A:V.113 Hydrogen bonds: A:V.111, A:V.111, A:V.113, A:R.119, A:G.121, A:G.121, A:L.122, A:L.123, A:R.124, A:S.147, A:E.148, A:R.154, A:R.154, F:D.286 Water bridges: A:H.117, A:R.120 Salt bridges: A:R.119, A:R.124, A:R.154 ACO.2: 21 residues within 4Å: Chain B: F.50, S.109, F.110, V.111, A.112, V.113, R.118, R.119, R.120, G.121, L.122, L.123, R.124, H.145, S.147, E.148, G.150, I.151, Y.152, R.154 Chain D: D.286 23 PLIP interactions: 1 interactions with chain D, 22 interactions with chain B Hydrogen bonds: D:D.286, B:F.110, B:V.111, B:V.111, B:V.113, B:R.119, B:G.121, B:G.121, B:L.122, B:L.123, B:R.124, B:S.147, B:E.148, B:R.154, B:R.154 Hydrophobic interactions: B:F.50, B:V.113, B:L.123, B:I.151 Water bridges: B:H.117, B:G.150 Salt bridges: B:R.119, B:R.154 ACO.3: 20 residues within 4Å: Chain A: D.286 Chain C: S.109, F.110, V.111, A.112, V.113, R.118, R.119, R.120, G.121, L.122, L.123, R.124, H.145, S.147, E.148, G.150, I.151, Y.152, R.154 22 PLIP interactions: 22 interactions with chain C Hydrophobic interactions: C:V.113, C:L.123, C:I.151 Hydrogen bonds: C:F.110, C:V.111, C:V.111, C:V.113, C:R.119, C:R.119, C:G.121, C:G.121, C:L.123, C:R.124, C:S.147, C:E.148, C:R.154, C:R.154 Salt bridges: C:R.119, C:R.119, C:R.124, C:R.154 pi-Cation interactions: C:R.119 ACO.4: 22 residues within 4Å: Chain D: F.50, S.109, F.110, V.111, A.112, V.113, R.118, R.119, R.120, G.121, L.122, L.123, R.124, H.145, S.147, E.148, G.150, I.151, Y.152, R.154 Chain E: D.286, S.287 23 PLIP interactions: 23 interactions with chain D Hydrophobic interactions: D:F.50, D:V.113, D:L.123, D:I.151 Hydrogen bonds: D:F.110, D:V.111, D:V.111, D:V.113, D:R.119, D:R.119, D:R.119, D:G.121, D:G.121, D:L.122, D:L.123, D:R.124, D:S.147, D:E.148, D:R.154, D:R.154 Salt bridges: D:R.119, D:R.124, D:R.154 ACO.5: 21 residues within 4Å: Chain B: D.286 Chain E: F.50, S.109, F.110, V.111, A.112, V.113, R.118, R.119, R.120, G.121, L.122, L.123, R.124, H.145, S.147, E.148, G.150, I.151, Y.152, R.154 22 PLIP interactions: 22 interactions with chain E Hydrophobic interactions: E:F.50, E:V.113, E:L.123, E:L.123, E:I.151 Hydrogen bonds: E:F.110, E:V.111, E:V.111, E:V.113, E:R.119, E:G.121, E:G.121, E:L.122, E:L.123, E:R.124, E:R.124, E:S.147, E:E.148, E:R.154, E:R.154 Salt bridges: E:R.119, E:R.154 ACO.6: 21 residues within 4Å: Chain C: D.286 Chain F: F.50, S.109, F.110, V.111, A.112, V.113, R.118, R.119, R.120, G.121, L.122, L.123, R.124, H.145, S.147, E.148, G.150, I.151, Y.152, R.154 20 PLIP interactions: 19 interactions with chain F, 1 interactions with chain C Hydrophobic interactions: F:I.151 Hydrogen bonds: F:F.110, F:V.111, F:V.111, F:V.113, F:R.119, F:R.119, F:G.121, F:G.121, F:L.122, F:L.123, F:R.124, F:R.124, F:S.147, F:E.148, F:R.154, F:R.154 Salt bridges: F:R.119, F:R.154 Water bridges: C:D.286

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kim, K.H. et al., Mycobacterium tuberculosis Eis protein initiates suppression of host immune responses by acetylation of DUSP16/MKP-7. Proc.Natl.Acad.Sci.USA (2012)

Release Date

2012-05-23

Peptides

Enhanced intracellular survival protein: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
G

B
H

C
I

D
J

E
K

F
L

Enhanced intracellular survival protein

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