SMTL ID : 3rz1.1

Fluoroalkyl and Alkyl Chains Have Similar Hydrophobicities in Binding to the Hydrophobic Wall of Carbonic Anhydrase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.51 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 6 residues within 4Å: Chain A: H.93, H.95, E.105, H.118, T.197 Ligands: RZ1.2 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.93, A:H.95, A:H.118

1 x RZ1: N-(2,2,3,3,4,4,5,5,5-nonafluoropentyl)-4-sulfamoylbenzamide(Non-covalent)

RZ1.2: 16 residues within 4Å: Chain A: Q.91, H.93, H.95, H.118, V.120, F.129, V.133, V.141, S.195, L.196, T.197, T.198, P.200, L.202, W.207 Ligands: ZN.1 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:V.120, A:L.196, A:L.196 Hydrogen bonds: A:T.197, A:T.197 Water bridges: A:N.66, A:Q.91, A:Q.91, A:Q.91, A:T.198

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.3: 4 residues within 4Å: Chain A: D.241, N.242, W.243, P.245 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:W.243 pi-Cation interactions: A:W.243, A:W.243

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mecinovic, J. et al., Fluoroalkyl and alkyl chains have similar hydrophobicities in binding to the "hydrophobic wall" of carbonic anhydrase. J.Am.Chem.Soc. (2011)

Release Date

2011-08-10

Peptides

Carbonic anhydrase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Carbonic anhydrase 2

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