SMTL ID : 3s6f.1

Crystal structure of a putative acetyltransferase (DR_1678) from Deinococcus radiodurans R1 at 1.19 A resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.19 Å

Oligo State

homo-dimer

Ligands

2 x COA: COENZYME A(Non-covalent)

COA.1: 15 residues within 4Å: Chain A: L.79, E.80, V.81, R.86, S.87, L.88, G.89, L.90, G.91, S.92, D.115, V.116, F.119, Y.120, R.122 21 PLIP interactions: 21 interactions with chain A Hydrophobic interactions: A:L.79, A:V.116 Hydrogen bonds: A:L.79, A:V.81, A:R.86, A:S.87, A:G.89, A:L.90, A:G.91, A:S.92, A:D.115, A:R.122, A:R.122 Water bridges: A:R.86, A:S.87, A:S.87, A:S.87, A:L.88, A:S.92, A:S.92, A:S.92 COA.4: 15 residues within 4Å: Chain B: L.79, E.80, V.81, R.86, S.87, L.88, G.89, L.90, G.91, S.92, D.115, V.116, F.119, Y.120, R.122 22 PLIP interactions: 22 interactions with chain B Hydrophobic interactions: B:L.79, B:V.116 Hydrogen bonds: B:L.79, B:V.81, B:R.86, B:S.87, B:G.89, B:L.90, B:G.91, B:S.92, B:D.115, B:D.115, B:R.122, B:R.122 Water bridges: B:R.86, B:S.87, B:S.87, B:S.87, B:L.88, B:S.92, B:S.92, B:S.92

4 x CA: CALCIUM ION(Non-functional Binders)(Non-covalent)

CA.2: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) CA.3: 1 residues within 4Å: Chain A: S.87 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:S.87, A:S.87, H2O.2, H2O.8, H2O.8 CA.5: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) CA.6: 1 residues within 4Å: Chain B: S.87 5 PLIP interactions: 2 interactions with chain B, 3 Ligand-Water interactions Metal complexes: B:S.87, B:S.87, H2O.11, H2O.17, H2O.17

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Joint Center for Structural Genomics (JCSG), Crystal structure of a Hypothetical acetyltransferase (DR_1678) from Deinococcus radiodurans at 1.19 A resolution. To be Published

Release Date

2011-07-06

Peptides

Hypothetical acetyltransferase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Hypothetical acetyltransferase