SMTL ID : 3saj.1 (1 other biounit)

Crystal Structure of glutamate receptor GluA1 Amino Terminal Domain

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-dimer

Ligands

1 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA.1: 5 residues within 4Å: Chain A: N.49, S.51, D.52, R.78 Chain B: T.103 1 PLIP interactions: 1 interactions with chain B Hydrophobic interactions: B:T.103

4 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.2: 8 residues within 4Å: Chain A: E.183, G.209, I.210, G.211, Y.212, H.213, G.233, N.235 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.183 NAG-NAG.3: 5 residues within 4Å: Chain A: R.331, E.333, N.338, Q.340, N.349 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.331 NAG-NAG.4: 5 residues within 4Å: Chain A: T.103 Chain B: N.49, S.51, D.52, R.78 2 PLIP interactions: 1 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:T.103 Hydrogen bonds: B:R.78 NAG-NAG.5: 7 residues within 4Å: Chain B: E.183, I.210, G.211, Y.212, H.213, G.233, N.235 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:E.183

1 x NAG- NAG- BMA- MAN- MAN- MAN- MAN: alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG-BMA-MAN-MAN-MAN-MAN.6: 4 residues within 4Å: Chain B: R.331, N.338, Q.340, N.349 No protein-ligand interaction detected (PLIP)

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.7: 5 residues within 4Å: Chain A: N.243, T.245, H.353, I.355, K.364 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:I.355 Hydrogen bonds: A:N.243, A:T.245, A:K.364

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yao, G. et al., Crystal structure of the glutamate receptor GluA1 N-terminal domain. Biochem.J. (2011)

Release Date

2011-06-22

Peptides

Glutamate receptor 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

Glutamate receptor 1

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