SMTL ID : 3sbt.1 (2 other biounits)

Crystal structure of a Aar2-Prp8 complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

hetero-1-1-mer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 2 residues within 4Å: Chain B: A.39, T.40 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:T.40 SO4.2: 3 residues within 4Å: Chain B: K.53, S.168, S.169 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:S.169, B:S.169 Water bridges: B:S.168, B:S.169, B:Y.170 Salt bridges: B:K.53

1 x PGO: S-1,2-PROPANEDIOL(Non-covalent)

PGO.3: 7 residues within 4Å: Chain B: S.138, I.139, D.140, L.194, I.202, L.207, W.208 4 PLIP interactions: 4 interactions with chain B Hydrophobic interactions: B:L.194 Hydrogen bonds: B:D.140, B:L.207 Water bridges: B:K.141

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Weber, G. et al., Mechanism for Aar2p function as a U5 snRNP assembly factor. Genes Dev. (2011)

Release Date

2011-07-27

Peptides

A1 cistron-splicing factor AAR2: A
Pre-mRNA-splicing factor 8: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
A

A1 cistron-splicing factor AAR2

Pre-mRNA-splicing factor 8

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