SMTL ID : 3shi.3 (2 other biounits)

Crystal structure of human MMP1 catalytic domain at 2.2 A resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 3 residues within 4Å: Chain A: H.113, H.117, H.123 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.113, A:H.117, A:H.123, H2O.1, H2O.2 ZN.2: 5 residues within 4Å: Chain A: H.63, D.65, S.67, H.78, H.91 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.63, A:D.65, A:H.78, A:H.91

3 x CA: CALCIUM ION(Non-covalent)

CA.3: 6 residues within 4Å: Chain A: D.70, G.71, G.73, N.75, D.93, E.96 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.70, A:G.73, A:N.75, A:D.93, A:E.96 CA.4: 3 residues within 4Å: Chain A: D.19, E.94, E.96 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.19, A:E.94, A:E.94, A:E.96, H2O.1 CA.5: 5 residues within 4Å: Chain A: A.52, D.53, G.85, G.87, D.89 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:D.53, A:G.85, A:G.87, A:D.89

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bertini, I. et al., The catalytic domain of MMP-1 studied through tagged lanthanides. Febs Lett. (2012)

Release Date

2011-09-21

Peptides

Interstitial collagenase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
M

Interstitial collagenase

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