SMTL ID : 3sjd.1 (1 other biounit)

Crystal structure of S. cerevisiae Get3 with bound ADP-Mg2+ in complex with Get2 cytosolic domain

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 4.60 Å

Oligo State

hetero-2-1-mer

Ligands

2 x ADP: ADENOSINE-5'-DIPHOSPHATE(Covalent)

ADP.1: 15 residues within 4Å: Chain A: G.27, V.29, G.30, K.31, T.32, T.33, N.272, Q.273, P.315, L.316, C.317, E.320, I.321 Chain B: E.245 Ligands: MG.2 15 PLIP interactions: 15 interactions with chain A Hydrogen bonds: A:G.27, A:V.29, A:G.30, A:K.31, A:T.32, A:T.32, A:T.33, A:T.33, A:N.272, A:Q.273, A:Q.273, A:P.315, A:C.317, A:I.321 Salt bridges: A:K.31 ADP.3: 15 residues within 4Å: Chain A: E.245 Chain B: G.27, V.29, G.30, K.31, T.32, T.33, N.272, Q.273, P.315, L.316, C.317, E.320, I.321 Ligands: MG.4 14 PLIP interactions: 14 interactions with chain B Hydrogen bonds: B:G.27, B:V.29, B:G.30, B:K.31, B:T.32, B:T.32, B:T.33, B:T.33, B:N.272, B:Q.273, B:P.315, B:C.317, B:I.321 Salt bridges: B:K.31

2 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 5 residues within 4Å: Chain A: K.31, T.32, N.61, D.166 Ligands: ADP.1 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:T.32 MG.4: 5 residues within 4Å: Chain B: K.31, T.32, N.61, D.166 Ligands: ADP.3 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:T.32

1 x ZN: ZINC ION(Non-covalent)

ZN.5: 4 residues within 4Å: Chain A: C.285, C.288 Chain B: C.285, C.288 3 PLIP interactions: 2 interactions with chain A, 1 interactions with chain B Metal complexes: A:C.285, A:C.288, B:C.288

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Stefer, S. et al., Structural basis for tail-anchored membrane protein biogenesis by the Get3-receptor complex. Science (2011)

Release Date

2011-07-13

Peptides

ATPase GET3: AB
Golgi to ER traffic protein 2: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
E

ATPase GET3

Golgi to ER traffic protein 2

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