Toggle navigation
Modelling
myWorkspace
Alignment Mode
User Template Mode
DeepView Project Mode
Modelling API
Template Library
Repository
SWISS-MODEL Repository
Repository API
3D-Beacons API
Annotation Projects
TBvar3D
Tools
Structure Assessment
Structure Comparison
QMEAN
Documentation
SWISS-MODEL
Examples
Video Tutorial
New Features
SWISS-MODEL Repository
QMEAN
Structure Assessment
Structure Comparison
TBvar3D
Protein Structure Course
References
Log in
Create Account
SMTL ID : 3sju.2
(2 other biounits)
Hedamycin Polyketide Ketoreductase bound to NADPH
Coordinates
PDB Format
Compare
Method
X-RAY DIFFRACTION 2.40 Å
Oligo State
homo-dimer
Ligands
2 x
NDP
:
NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
(Non-covalent)
NDP.1:
28 residues within 4Å:
Chain A:
G.31
,
S.33
,
S.34
,
G.35
,
I.36
,
A.55
,
R.56
,
D.57
,
C.80
,
D.81
,
V.82
,
T.83
,
S.108
,
A.109
,
G.110
,
T.131
,
I.160
,
A.161
,
S.162
,
Y.175
,
K.179
,
P.205
,
G.206
,
Y.207
,
V.208
,
T.210
,
M.212
,
R.215
24
PLIP interactions
:
24 interactions with chain A
Hydrophobic interactions:
A:P.205
Hydrogen bonds:
A:G.31
,
A:S.33
,
A:S.33
,
A:S.33
,
A:S.34
,
A:S.34
,
A:S.34
,
A:I.36
,
A:R.56
,
A:D.57
,
A:D.81
,
A:V.82
,
A:A.109
,
A:G.110
,
A:K.179
,
A:V.208
,
A:V.208
,
A:T.210
,
A:M.212
,
A:R.215
Water bridges:
A:G.37
Salt bridges:
A:R.56
pi-Cation interactions:
A:R.56
NDP.2:
28 residues within 4Å:
Chain B:
G.31
,
S.33
,
S.34
,
G.35
,
I.36
,
A.55
,
R.56
,
D.57
,
C.80
,
D.81
,
V.82
,
T.83
,
S.108
,
A.109
,
G.110
,
T.131
,
I.160
,
A.161
,
S.162
,
Y.175
,
K.179
,
P.205
,
G.206
,
V.208
,
T.210
,
P.211
,
M.212
,
R.215
23
PLIP interactions
:
23 interactions with chain B
Hydrophobic interactions:
B:P.205
Hydrogen bonds:
B:G.31
,
B:S.33
,
B:S.33
,
B:S.33
,
B:S.34
,
B:S.34
,
B:I.36
,
B:R.56
,
B:D.57
,
B:D.81
,
B:V.82
,
B:A.109
,
B:G.110
,
B:Y.175
,
B:K.179
,
B:V.208
,
B:V.208
,
B:M.212
Water bridges:
B:G.37
,
B:G.37
Salt bridges:
B:R.56
,
B:R.215
Links
RCSB
PDBe
PDBe-KB
PDBj
PDBsum
CATH
PLIP
Citation
Javidpour, P. et al., Structural and Biochemical Studies of the Hedamycin Type II Polyketide Ketoreductase (HedKR): Molecular Basis of Stereo- and Regiospecificities. Biochemistry (2011)
Release Date
2011-09-07
Peptides
Keto reductase:
A
B
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
Export Alignment
FASTA format
Clustal Format
PNG Image
Secondary Structure
None
DSSP
PSIPRED
SSpro
Colour Scheme
Fade Mismatches
Enhance Mismatches
Chain
Unique Chain
Rainbow
2° Structure
Bfactor
Bfactor Range
SOA
Entropy
Clustal
Hydrophobic
Size
Charged
Polar
Proline
Ser/Thr
Cysteine
Aliphatic
Aromatic
No Colour
Background
3D Viewer
NGL
PV
2D
FASTA
Multi FASTA
ClustalW
PNG
Keto reductase
Toggle Identical (AB)
Related Entries With Identical Sequence
3sju.1
|
3sju.3
Cartoon
Cartoon
Tube
Trace
Lines
Ball+Stick
Licorice
Hyperball
Rope
Surface
Spacefill
Outline
Fog
Background
Transparent
Resolution
Low
Medium
High
Extreme