SMTL ID : 3soo.1 (1 other biounit)

Crystal structure of a LINE-1 type transposase domain-containing protein 1 (L1TD1) from HOMO SAPIENS at 2.73 A resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.73 Å

Oligo State

homo-dimer

Ligands

10 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: Q.72, K.73, S.74 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.72, A:S.74 SO4.2: 4 residues within 4Å: Chain A: S.61, D.62, L.63 Chain B: W.27 2 PLIP interactions: 1 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:L.63, B:W.27 SO4.3: 2 residues within 4Å: Chain A: R.67, K.68 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.71 Salt bridges: A:R.67 SO4.4: 2 residues within 4Å: Chain A: M.4, D.5 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.5 SO4.5: 2 residues within 4Å: Chain A: S.24, K.25 No protein-ligand interaction detected (PLIP) SO4.6: 3 residues within 4Å: Chain B: Q.72, K.73, S.74 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:Q.72, B:S.74 SO4.7: 4 residues within 4Å: Chain A: W.27 Chain B: S.61, D.62, L.63 2 PLIP interactions: 1 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:L.63, A:W.27 SO4.8: 2 residues within 4Å: Chain B: R.67, K.68 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:S.71 Salt bridges: B:R.67 SO4.9: 2 residues within 4Å: Chain B: M.4, D.5 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:D.5 SO4.10: 2 residues within 4Å: Chain B: S.24, K.25 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Joint Center for Structural Genomics (JCSG) et al., Crystal structure of a LINE-1 type transposase domain-containing protein 1 (L1TD1) from HOMO SAPIENS at 2.73 A resolution. To be published

Release Date

2011-07-20

Peptides

LINE-1 type transposase domain-containing protein 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

LINE-1 type transposase domain-containing protein 1

Related Entries With Identical Sequence