SMTL ID : 3sp1.2 (1 other biounit)

Crystal structure of cysteinyl-tRNA synthetase (cysS) from Borrelia burgdorferi

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.55 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.48, C.242, H.267, E.271 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:C.48, A:C.242, A:H.267, H2O.2

1 x AMP: ADENOSINE MONOPHOSPHATE(Non-covalent)

AMP.2: 15 residues within 4Å: Chain A: P.50, T.51, H.57, G.59, N.60, T.63, Y.64, G.260, D.262, H.263, E.291, F.292, L.293, K.299, M.300 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:T.51, A:N.60, A:T.63, A:G.260, A:D.262, A:L.293, A:L.293, A:M.300 Water bridges: A:C.48 pi-Stacking: A:F.292

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 2 residues within 4Å: Chain A: R.62, C.327 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Moen, S.O. et al., Ligand co-crystallization of aminoacyl-tRNA synthetases from infectious disease organisms. Sci Rep (2017)

Release Date

2011-08-17

Peptides

Cysteinyl-tRNA synthetase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Cysteinyl-tRNA synthetase

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