SMTL ID : 3ss9.1

Crystal structure of holo D-serine dehydratase from Escherichia coli at 1.97 A resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.97 Å

Oligo State

monomer

Ligands

1 x PLP: PYRIDOXAL-5'-PHOSPHATE(Covalent)

PLP.1: 16 residues within 4Å: Chain A: I.117, K.118, N.170, P.277, C.278, G.279, V.280, G.281, G.282, G.283, P.284, L.340, E.384, S.386, T.424, G.425 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:I.117, A:K.118, A:L.340 Hydrogen bonds: A:N.170, A:G.279, A:V.280, A:G.281, A:G.283, A:T.424 Water bridges: A:Y.248 Salt bridges: A:K.118

1 x K: POTASSIUM ION(Non-covalent)

K.2: 7 residues within 4Å: Chain A: C.278, G.279, E.305, S.309, C.311, L.340, V.342 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.278, A:G.279, A:E.305, A:S.309

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Urusova, D.V. et al., Crystal structure of D-serine dehydratase from Escherichia coli. Biochim.Biophys.Acta (2011)

Release Date

2012-01-18

Peptides

D-serine dehydratase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
X

D-serine dehydratase

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