SMTL ID : 3sxr.3 (2 other biounits)

Crystal structure of BMX non-receptor tyrosine kinase complex with dasatinib

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-dimer

Ligands

2 x 1N1: N-(2-CHLORO-6-METHYLPHENYL)-2-({6-[4-(2-HYDROXYETHYL)PIPERAZIN-1-YL]-2-METHYLPYRIMIDIN-4-YL}AMINO)-1,3-THIAZOLE-5-CARBOXAMIDE(Non-covalent)

1N1.1: 17 residues within 4Å: Chain A: L.16, V.24, A.36, V.37, K.38, M.57, V.66, I.80, T.82, E.83, Y.84, I.85, S.86, G.88, L.136, S.146, F.148 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:L.16, A:L.16, A:K.38, A:V.66, A:I.80, A:T.82, A:Y.84, A:L.136, A:F.148 Hydrogen bonds: A:T.82, A:I.85, A:I.85 1N1.3: 16 residues within 4Å: Chain B: L.16, V.24, A.36, K.38, M.57, V.66, I.80, T.82, E.83, Y.84, I.85, S.86, G.88, L.136, S.146, F.148 12 PLIP interactions: 12 interactions with chain B Hydrophobic interactions: B:L.16, B:K.38, B:V.66, B:T.82, B:Y.84, B:L.136, B:F.148 Hydrogen bonds: B:T.82, B:T.82, B:I.85, B:I.85 Water bridges: B:C.89

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 5 residues within 4Å: Chain A: S.200, K.203, Y.225, P.227, H.228 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:Y.225, A:Y.225, A:H.228 Water bridges: A:L.229 Salt bridges: A:K.203, A:H.228 SO4.4: 7 residues within 4Å: Chain A: Y.159, V.160, S.161 Chain B: G.1, H.2, M.3, E.4 6 PLIP interactions: 4 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:G.1, B:H.2, B:M.3, B:E.4, A:Y.159, A:S.161 SO4.5: 5 residues within 4Å: Chain B: K.203, Y.225, R.226, P.227, H.228 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:Y.225, B:H.228 Salt bridges: B:K.203

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Muckelbauer, J. et al., X-ray crystal structure of bone marrow kinase in the x chromosome: a Tec family kinase. Chem.Biol.Drug Des. (2011)

Release Date

2011-09-21

Peptides

Cytoplasmic tyrosine-protein kinase BMX: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Cytoplasmic tyrosine-protein kinase BMX

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