- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.91 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
- 2 x LMT: DODECYL-BETA-D-MALTOSIDE(Non-covalent)
LMT.2: 16 residues within 4Å:- Chain A: G.165, Y.168, E.169, M.172, I.213, L.214, E.220, C.359, F.360, A.361, M.363, A.368, A.369, F.370, F.384, Y.386
9 PLIP interactions:9 interactions with chain A- Hydrophobic interactions: A:I.213, A:L.214, A:A.361, A:F.370, A:F.384, A:Y.386
- Hydrogen bonds: A:E.220, A:Y.386
- Water bridges: A:Y.386
LMT.10: 16 residues within 4Å:- Chain B: G.165, Y.168, E.169, M.172, I.213, L.214, E.220, C.359, F.360, A.361, M.363, A.368, A.369, F.370, F.384, Y.386
9 PLIP interactions:9 interactions with chain B- Hydrophobic interactions: B:I.213, B:L.214, B:A.361, B:F.370, B:F.384, B:Y.386
- Hydrogen bonds: B:E.220, B:Y.386
- Water bridges: B:Y.386
- 10 x H2S: HYDROSULFURIC ACID(Non-covalent)
H2S.3: 5 residues within 4Å:- Chain A: F.164, G.165, C.359
- Ligands: H2S.5, H2S.6
No protein-ligand interaction detected (PLIP)H2S.4: 5 residues within 4Å:- Chain A: L.112, A.129, C.131, T.132, H.135
No protein-ligand interaction detected (PLIP)H2S.5: 5 residues within 4Å:- Chain A: C.163, P.322
- Ligands: FAD.1, H2S.3, H2S.6
No protein-ligand interaction detected (PLIP)H2S.6: 5 residues within 4Å:- Chain A: T.324, C.359
- Ligands: FAD.1, H2S.3, H2S.5
No protein-ligand interaction detected (PLIP)H2S.7: 3 residues within 4Å:- Chain A: K.377, P.378, R.379
No protein-ligand interaction detected (PLIP)H2S.11: 5 residues within 4Å:- Chain B: F.164, G.165, C.359
- Ligands: H2S.13, H2S.14
No protein-ligand interaction detected (PLIP)H2S.12: 5 residues within 4Å:- Chain B: L.112, A.129, C.131, T.132, H.135
No protein-ligand interaction detected (PLIP)H2S.13: 5 residues within 4Å:- Chain B: C.163, P.322
- Ligands: FAD.9, H2S.11, H2S.14
No protein-ligand interaction detected (PLIP)H2S.14: 5 residues within 4Å:- Chain B: T.324, C.359
- Ligands: FAD.9, H2S.11, H2S.13
No protein-ligand interaction detected (PLIP)H2S.15: 3 residues within 4Å:- Chain B: K.377, P.378, R.379
No protein-ligand interaction detected (PLIP)- 2 x SO4: SULFATE ION(Non-functional Binders)
SO4.8: 4 residues within 4Å:- Chain A: M.1, H.6, H.100, D.102
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:M.1, A:D.102
- Water bridges: A:H.100
- Salt bridges: A:H.6, A:H.100
SO4.16: 4 residues within 4Å:- Chain B: M.1, H.6, H.100, D.102
6 PLIP interactions:6 interactions with chain B- Hydrogen bonds: B:M.1, B:D.102
- Water bridges: B:E.32, B:H.100
- Salt bridges: B:H.6, B:H.100
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Cherney, M.M. et al., Structure-activity characterization of sulfide:quinone oxidoreductase variants. J.Struct.Biol. (2012)
- Release Date
- 2012-05-16
- Peptides
- Sulfide-quinone reductase, putative: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.91 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
- 2 x LMT: DODECYL-BETA-D-MALTOSIDE(Non-covalent)
- 10 x H2S: HYDROSULFURIC ACID(Non-covalent)
- 2 x SO4: SULFATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Cherney, M.M. et al., Structure-activity characterization of sulfide:quinone oxidoreductase variants. J.Struct.Biol. (2012)
- Release Date
- 2012-05-16
- Peptides
- Sulfide-quinone reductase, putative: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A