- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.15 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
- 2 x LMT: DODECYL-BETA-D-MALTOSIDE(Non-covalent)
LMT.2: 16 residues within 4Å:- Chain A: G.165, Y.168, M.172, I.213, L.214, E.220, C.359, A.361, M.363, A.368, A.369, F.370, F.384, Y.386
- Chain B: G.208, D.209
13 PLIP interactions:11 interactions with chain A, 2 interactions with chain B- Hydrophobic interactions: A:Y.168, A:I.213, A:L.214, A:A.361, A:F.370, A:F.370, A:F.384, A:Y.386
- Hydrogen bonds: A:E.220, A:Y.386
- Water bridges: A:Y.386, B:D.209, B:D.209
LMT.8: 16 residues within 4Å:- Chain A: G.208, D.209
- Chain B: G.165, Y.168, M.172, I.213, L.214, E.220, C.359, A.361, M.363, A.368, A.369, F.370, F.384, Y.386
14 PLIP interactions:11 interactions with chain B, 3 interactions with chain A- Hydrophobic interactions: B:Y.168, B:I.213, B:L.214, B:A.361, B:F.370, B:F.370, B:F.384, B:Y.386
- Hydrogen bonds: B:E.220, B:Y.386
- Water bridges: B:Y.386, A:D.209, A:D.209, A:D.209
- 2 x SO4: SULFATE ION(Non-functional Binders)
SO4.3: 4 residues within 4Å:- Chain A: M.1, H.6, H.100, D.102
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:M.1, A:M.1
- Salt bridges: A:H.6, A:H.100
SO4.9: 4 residues within 4Å:- Chain B: M.1, H.6, H.100, D.102
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:M.1, B:M.1
- Salt bridges: B:H.6, B:H.100
- 2 x 6SE: TRISELANE(Non-covalent)
- 4 x SE: SELENIUM ATOM(Non-covalent)
SE.5: 6 residues within 4Å:- Chain A: T.324, V.358, C.359
- Ligands: FAD.1, 6SE.4, SE.6
No protein-ligand interaction detected (PLIP)SE.6: 5 residues within 4Å:- Chain A: G.165, C.359, F.370
- Ligands: 6SE.4, SE.5
No protein-ligand interaction detected (PLIP)SE.11: 6 residues within 4Å:- Chain B: T.324, V.358, C.359
- Ligands: FAD.7, 6SE.10, SE.12
No protein-ligand interaction detected (PLIP)SE.12: 5 residues within 4Å:- Chain B: G.165, C.359, F.370
- Ligands: 6SE.10, SE.11
No protein-ligand interaction detected (PLIP)- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Cherney, M.M. et al., Structure-activity characterization of sulfide:quinone oxidoreductase variants. J.Struct.Biol. (2012)
- Release Date
- 2012-05-16
- Peptides
- Sulfide-quinone reductase, putative: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.15 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
- 2 x LMT: DODECYL-BETA-D-MALTOSIDE(Non-covalent)
- 2 x SO4: SULFATE ION(Non-functional Binders)
- 2 x 6SE: TRISELANE(Non-covalent)
- 4 x SE: SELENIUM ATOM(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Cherney, M.M. et al., Structure-activity characterization of sulfide:quinone oxidoreductase variants. J.Struct.Biol. (2012)
- Release Date
- 2012-05-16
- Peptides
- Sulfide-quinone reductase, putative: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A