SMTL ID : 3t00.1

Crystal Structure of Phosphonoacetate hydrolase from Sinorhizobium meliloti 1021 in complex with vanadate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 6 residues within 4Å: Chain A: D.32, T.71, D.214, D.253, H.254 Ligands: VO4.3 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.32, A:D.32, A:T.71, A:D.253, A:H.254 ZN.2: 5 residues within 4Å: Chain A: D.214, H.218, H.254, H.380 Ligands: VO4.3 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:D.214, A:D.214, A:H.218, A:H.380

1 x VO4: VANADATE ION(Non-covalent)

VO4.3: 10 residues within 4Å: Chain A: D.32, F.70, T.71, D.214, H.218, H.254, I.290, H.380 Ligands: ZN.1, ZN.2 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:T.71, A:I.290 Water bridges: A:N.92, A:D.214

1 x NI: NICKEL (II) ION(Non-covalent)

NI.4: 4 residues within 4Å: Chain A: R.178, A.187, E.190, F.191 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Agarwal, V. et al., Structural and mechanistic insights into C-p bond hydrolysis by phosphonoacetate hydrolase. Chem.Biol. (2011)

Release Date

2011-08-03

Peptides

phosphonoacetate hydrolase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

phosphonoacetate hydrolase

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