SMTL ID : 3t03.2 (1 other biounit)

Crystal structure of PPAR gamma ligand binding domain in complex with a novel partial agonist GQ-16

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

hetero-1-1-mer

Ligands

1 x 3T0: (5Z)-5-(5-bromo-2-methoxybenzylidene)-3-(4-methylbenzyl)-1,3-thiazolidine-2,4-dione(Non-covalent)

3T0.1: 15 residues within 4Å: Chain A: I.88, C.92, R.95, S.96, A.99, I.133, M.136, L.137, L.140, I.148, M.155, L.160, F.170, M.171, K.174 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:I.88, A:R.95, A:A.99, A:I.133, A:L.137, A:L.160, A:F.170 pi-Cation interactions: A:R.95

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Amato, A.A. et al., GQ-16, a novel peroxisome proliferator-activated receptor (PPAR gamma) ligand, promotes insulin sensitization without weight gain. J.Biol.Chem. (2012)

Release Date

2012-05-23

Peptides

Peroxisome proliferator-activated receptor gamma: A
Nuclear receptor coactivator 1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
D

Peroxisome proliferator-activated receptor gamma

Nuclear receptor coactivator 1

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