SMTL ID : 3t0q.1

Motor Domain Structure of the Kar3-like kinesin from Ashbya gossypii

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.35 Å

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 2 residues within 4Å: Chain A: T.100 Ligands: ADP.2 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:T.100, H2O.1, H2O.1, H2O.1, H2O.4

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.2: 13 residues within 4Å: Chain A: R.12, R.14, P.15, L.17, Q.94, T.95, G.96, S.97, G.98, K.99, T.100, Y.101 Ligands: MG.1 16 PLIP interactions: 16 interactions with chain A Hydrogen bonds: A:R.12, A:G.96, A:S.97, A:G.98, A:K.99, A:T.100, A:T.100, A:Y.101 Water bridges: A:T.95, A:K.99, A:K.99, A:T.100, A:D.247 Salt bridges: A:K.99 pi-Stacking: A:Y.101, A:Y.101

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 10 residues within 4Å: Chain A: I.141, Y.142, N.143, E.144, R.219, S.220, H.221, N.269, I.270, S.273 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.143, A:E.144, A:E.144, A:R.219

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Duan, D. et al., Crystal structure of the Kar3-like kinesin motor domain from the filamentous fungus Ashbya gossypii. Proteins (2012)

Release Date

2012-04-04

Peptides

AGR253Wp: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

AGR253Wp