SMTL ID : 3t1g.1

Engineering of organophosphate hydrolase by computational design and directed evolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.35 Å

Oligo State

monomer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: H.16, H.18, H.215, H.239, D.296 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.16, A:H.18, A:H.215, A:D.296, H2O.2 ZN.2: 3 residues within 4Å: Chain A: D.42, E.46 Ligands: ZN.4 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:E.46 ZN.3: 2 residues within 4Å: Chain A: D.124, D.129 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.124, A:D.129, H2O.5 ZN.4: 2 residues within 4Å: Chain A: D.42 Ligands: ZN.2 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:D.42

1 x CA: CALCIUM ION(Non-covalent)

CA.5: 4 residues within 4Å: Chain A: E.187, E.218, F.219, G.220 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.187, A:E.187, H2O.5

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Khare, S.D. et al., Computational redesign of a mononuclear zinc metalloenzyme for organophosphate hydrolysis. Nat.Chem.Biol. (2012)

Release Date

2012-02-08

Peptides

organophosphate hydrolase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

organophosphate hydrolase