SMTL ID : 3t1o.1 (1 other biounit)

MglA bound to GDP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)

GDP.1: 17 residues within 4Å: Chain A: G.23, L.24, S.25, G.26, K.27, T.28, T.29, P.82, G.83, N.143, K.144, D.146, L.147, V.172, A.173, T.174 Ligands: MG.3 17 PLIP interactions: 17 interactions with chain A Hydrogen bonds: A:L.24, A:S.25, A:G.26, A:K.27, A:T.28, A:T.28, A:T.29, A:T.29, A:G.83, A:G.83, A:N.143, A:K.144, A:K.144, A:A.173, A:T.174 Salt bridges: A:K.27, A:D.146

1 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.2: 3 residues within 4Å: Chain A: P.167, V.168, E.185 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:P.167 Hydrogen bonds: A:V.168, A:E.185

4 x MG: MAGNESIUM ION(Non-covalent)

MG.3: 7 residues within 4Å: Chain A: G.23, K.27, V.81, P.82, G.83, V.85 Ligands: GDP.1 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:V.81, A:G.83, H2O.1 MG.4: 8 residues within 4Å: Chain A: D.106, S.107, A.108, R.111, L.112, N.115, L.151, V.156 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:D.106, A:A.108 MG.5: 5 residues within 4Å: Chain A: R.123, L.126, A.127, L.131, T.132 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:R.123, A:L.131 MG.6: 4 residues within 4Å: Chain A: G.44, E.45, F.59, D.60 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:E.45, A:D.60

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Miertzschke, M. et al., Structural analysis of the Ras-like G protein MglA and its cognate GAP MglB and implications for bacterial polarity. Embo J. (2011)

Release Date

2011-08-31

Peptides

Gliding protein mglA: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Gliding protein mglA

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