SMTL ID : 3t5m.1

Crystal structure of the S112A mutant of mycrocine immunity protein (MccF) with AMP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

homo-dimer

Ligands

2 x AMP: ADENOSINE MONOPHOSPHATE(Non-covalent)

AMP.1: 9 residues within 4Å: Chain A: I.87, G.88, G.89, A.115, F.180, W.183, S.240, E.272, H.306 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:G.88, A:G.89, A:S.240, A:E.272 Water bridges: A:G.89, A:D.116, A:S.240, A:H.306 Salt bridges: A:H.306 pi-Stacking: A:F.180, A:W.183, A:W.183, A:W.183 AMP.3: 7 residues within 4Å: Chain B: I.87, G.88, A.115, F.180, W.183, E.272, H.306 12 PLIP interactions: 12 interactions with chain B Hydrogen bonds: B:G.88, B:E.272, B:H.306 Water bridges: B:G.88, B:G.89, B:G.89, B:N.213, B:S.241 Salt bridges: B:H.306 pi-Stacking: B:W.183, B:W.183, B:W.183

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 6 residues within 4Å: Chain A: W.221, G.222, M.226, P.227, C.228, I.229 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.222, A:I.229, A:I.229

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nocek, B. et al., Structural and Functional Characterization of Microcin C Resistance Peptidase MccF from Bacillus anthracis. J.Mol.Biol. (2012)

Release Date

2011-09-07

Peptides

Microcin immunity protein MccF: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Microcin immunity protein MccF