SMTL ID : 3t6r.2 (1 other biounit)

Structure of UHRF1 in complex with unmodified H3 N-terminal tail

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

monomer

Ligands

1 x ALA- ARG- THR- LYS- GLN: Histone H3.1t N-terminal peptide(Non-covalent)

ALA-ARG-THR-LYS-GLN.1: 14 residues within 4Å: Chain A: C.24, A.25, P.35, D.36, Q.38, L.39, M.40, C.41, D.42, D.45, A.47, E.63, D.64, W.66 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:P.35, A:P.35, A:W.66 Hydrogen bonds: A:C.24, A:P.35, A:Q.38, A:M.40, A:C.41, A:E.63 Water bridges: A:D.42 Salt bridges: A:D.42, A:D.45

4 x ZN: ZINC ION(Non-covalent)

ZN.2: 4 residues within 4Å: Chain A: C.10, C.13, C.21, C.24 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.10, A:C.13, A:C.21, A:C.24 ZN.3: 4 residues within 4Å: Chain A: C.26, C.29, H.49, C.52 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.26, A:C.29, A:H.49, A:C.52 ZN.4: 4 residues within 4Å: Chain A: C.41, C.44, C.68, C.71 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.41, A:C.44, A:C.68, A:C.71 ZN.5: 2 residues within 4Å: Chain A: H.27, E.70 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.27, A:E.70, A:E.70

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xie, S. et al., UHRF1 double tudor domain and the adjacent PHD finger act together to recognize K9me3-containing histone H3 tail. J.Mol.Biol. (2012)

Release Date

2011-11-23

Peptides

E3 ubiquitin-protein ligase UHRF1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

E3 ubiquitin-protein ligase UHRF1

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