SMTL ID : 3t7y.1 (2 other biounits)

Structure of an autocleavage-inactive mutant of the cytoplasmic domain of CT091, the YscU homologue of Chlamydia trachomatis

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-dimer

Ligands

3 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 2 residues within 4Å: Chain A: K.73, E.74 Ligand excluded by PLIP CL.8: 3 residues within 4Å: Chain A: G.39, V.40, R.43 Ligand excluded by PLIP CL.16: 3 residues within 4Å: Chain B: G.39, V.40, R.43 Ligand excluded by PLIP

3 x NA: SODIUM ION(Non-functional Binders)

NA.2: 4 residues within 4Å: Chain A: E.52 Chain B: R.60, N.61, V.62 3 PLIP interactions: 2 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:R.60, B:V.62, A:E.52 NA.9: 4 residues within 4Å: Chain A: R.60, N.61, V.62 Chain B: E.52 3 PLIP interactions: 2 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:R.60, A:V.62, B:E.52 NA.10: 3 residues within 4Å: Chain B: M.26, E.28 Ligands: FMT.11 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:E.28

9 x FMT: FORMIC ACID(Non-functional Binders)

FMT.3: 5 residues within 4Å: Chain A: N.61, P.63, L.64, Q.67, A.85 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.61, A:P.63, A:Q.67 FMT.4: 2 residues within 4Å: Chain A: E.28, K.29 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.28 FMT.5: 5 residues within 4Å: Chain A: E.71, G.72, K.76, F.77, P.79 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:K.73, A:K.76, A:F.77 FMT.6: 3 residues within 4Å: Chain A: V.62, P.63, H.66 No protein-ligand interaction detected (PLIP) FMT.11: 4 residues within 4Å: Chain B: M.26, E.28, K.29 Ligands: NA.10 No protein-ligand interaction detected (PLIP) FMT.12: 3 residues within 4Å: Chain B: L.64, Q.67, A.85 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:Q.67 FMT.13: 3 residues within 4Å: Chain B: V.62, P.63, H.66 No protein-ligand interaction detected (PLIP) FMT.14: 2 residues within 4Å: Chain B: K.7, H.8 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:K.7, B:K.7 FMT.15: 1 residues within 4Å: Chain B: K.29 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:K.29

1 x SIN: SUCCINIC ACID(Non-covalent)

SIN.7: 3 residues within 4Å: Chain A: M.26, E.28, K.29 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:E.28 Hydrogen bonds: A:E.28

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Singer, A.U. et al., Structure of an autocleavage-inactive mutant of the cytoplasmic domain of CT091, the YscU homologue of Chlamydia trachomatis. TO BE PUBLISHED

Release Date

2011-11-16

Peptides

Yop proteins translocation protein U: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Yop proteins translocation protein U

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