SMTL ID : 3t7z.1

Structure of Methanocaldococcus jannaschii Nop N-terminal domain

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.1: 2 residues within 4Å: Chain A: H.104, T.108 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:T.108 Salt bridges: A:H.104

1 x NA: SODIUM ION(Non-functional Binders)

NA.2: 2 residues within 4Å: Chain A: S.21, D.25 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.25

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 5 residues within 4Å: Chain A: E.19, V.20, N.74, E.77, F.78 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:E.19, A:V.20, A:V.20, A:F.78

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gagnon, K.T. et al., Structurally Conserved Nop56/58 N-terminal Domain Facilitates Archaeal Box C/D Ribonucleoprotein-guided Methyltransferase Activity. J.Biol.Chem. (2012)

Release Date

2012-04-11

Peptides

Nucleolar protein Nop 56/58: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Nucleolar protein Nop 56/58