SMTL ID : 3tea.1

Crystal structure of Arthrobacter sp. strain su 4-hydroxybenzoyl CoA thioesterase double mutant Q58E/E73A complexed with 4-hydroxyphenacyl CoA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-tetramer

Ligands

4 x 4CO: 4-HYDROXYPHENACYL COENZYME A(Non-covalent)

4CO.1: 23 residues within 4Å: Chain A: L.15, A.73, M.74, T.77, E.78, M.90, V.92, G.93, Q.94, A.145, R.147, P.148, R.150 Chain B: E.58, H.64, G.65, F.100, F.101, R.102, P.103 Chain C: G.119, S.120, T.121 29 PLIP interactions: 11 interactions with chain B, 4 interactions with chain C, 14 interactions with chain A Hydrophobic interactions: B:E.58, B:E.58, B:F.100, A:M.74, A:T.77, A:E.78, A:V.92, A:Q.94, A:A.145 Hydrogen bonds: B:G.65, B:F.100, C:S.120, C:S.120, C:T.121, C:T.122, A:E.78, A:G.93, A:P.148 Water bridges: B:E.58, B:R.59, B:Y.68, B:R.102, A:R.147, A:R.147 Salt bridges: B:R.102, A:R.150 pi-Stacking: B:H.64 pi-Cation interactions: A:R.150, A:R.150 4CO.2: 24 residues within 4Å: Chain A: E.58, H.64, G.65, F.100, F.101, R.102, P.103 Chain B: L.15, A.73, M.74, T.77, E.78, M.90, V.92, G.93, Q.94, R.147, P.148, R.150 Chain D: H.117, G.119, S.120, T.121, T.122 29 PLIP interactions: 13 interactions with chain B, 5 interactions with chain D, 11 interactions with chain A Hydrophobic interactions: B:M.74, B:T.77, B:E.78, B:V.92, B:Q.94, A:E.58, A:E.58, A:F.100 Hydrogen bonds: B:G.93, B:P.148, B:R.150, D:S.120, D:T.121, D:T.121, D:T.122, D:T.122, A:G.65, A:F.100 Water bridges: B:D.31, B:R.150, A:E.58, A:E.58, A:E.58, A:R.59 Salt bridges: B:R.150, A:R.102 pi-Cation interactions: B:R.150, B:R.150 pi-Stacking: A:H.64 4CO.3: 23 residues within 4Å: Chain A: G.119, S.120, T.121 Chain C: L.15, A.73, M.74, T.77, E.78, M.90, V.92, G.93, Q.94, A.145, R.147, P.148, R.150 Chain D: E.58, H.64, G.65, F.100, F.101, R.102, P.103 26 PLIP interactions: 9 interactions with chain D, 4 interactions with chain A, 13 interactions with chain C Hydrophobic interactions: D:E.58, D:E.58, D:F.100, C:M.74, C:T.77, C:E.78, C:V.92, C:Q.94, C:A.145 Hydrogen bonds: D:G.65, D:F.100, A:S.120, A:S.120, A:T.121, A:T.122, C:G.93, C:P.148 Water bridges: D:R.59, D:R.102, C:R.147, C:R.147 Salt bridges: D:R.102, C:R.150 pi-Stacking: D:H.64 pi-Cation interactions: C:R.150, C:R.150 4CO.4: 24 residues within 4Å: Chain B: H.117, G.119, S.120, T.121, T.122 Chain C: E.58, H.64, G.65, F.100, F.101, R.102, P.103 Chain D: L.15, A.73, M.74, T.77, E.78, M.90, V.92, G.93, Q.94, R.147, P.148, R.150 28 PLIP interactions: 5 interactions with chain B, 14 interactions with chain D, 9 interactions with chain C Hydrogen bonds: B:S.120, B:T.121, B:T.122, D:E.78, D:G.93, D:P.148, D:R.150, C:G.65, C:F.100 Water bridges: B:T.121, B:T.121, D:D.31, D:R.150, C:R.59, C:Y.68 Hydrophobic interactions: D:M.74, D:T.77, D:E.78, D:V.92, D:Q.94, C:E.58, C:E.58, C:F.100 Salt bridges: D:R.150, C:R.102 pi-Cation interactions: D:R.150, D:R.150 pi-Stacking: C:H.64

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Song, F. et al., The Catalytic Mechanism of the Hotdog-fold Enzyme Superfamily 4-Hydroxybenzoyl-CoA Thioesterase from Arthrobacter sp. Strain SU. Biochemistry (2012)

Release Date

2012-08-15

Peptides

4-hydroxybenzoyl-CoA thioesterase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

4-hydroxybenzoyl-CoA thioesterase