SMTL ID : 3tjv.1

Crystal structure of human granzyme H with a peptidyl substrate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

hetero-1-1-mer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: R.35, K.36, W.100 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:K.36 Water bridges: A:V.34, A:D.37 Salt bridges: A:K.36 SO4.2: 2 residues within 4Å: Chain A: R.96, K.97 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.97

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, L. et al., Structural insights into the substrate specificity of human granzyme H: the functional roles of a novel RKR motif. J.Immunol. (2012)

Release Date

2011-12-28

Peptides

Granzyme H: A
PTSYAGDDSG: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Granzyme H

PTSYAGDDSG

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