SMTL ID : 3tkm.1

Crystal structure PPAR delta binding GW0742

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

monomer

Ligands

1 x GW0: {4-[({2-[3-fluoro-4-(trifluoromethyl)phenyl]-4-methyl-1,3-thiazol-5-yl}methyl)sulfanyl]-2-methylphenoxy}acetic acid(Non-covalent)

GW0.1: 18 residues within 4Å: Chain A: W.62, V.79, F.80, R.82, C.83, T.86, T.87, H.121, F.125, L.128, V.139, V.146, L.151, I.161, H.247, M.251, L.267, Y.271 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:V.79, A:F.80, A:F.125, A:L.151, A:I.161 Hydrogen bonds: A:T.87, A:T.87 Salt bridges: A:H.121, A:H.247 pi-Stacking: A:H.247

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 2 residues within 4Å: Chain A: R.203, T.210 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:R.203, A:R.203, A:T.210 Water bridges: A:S.2, A:T.210

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Batista, F.A. et al., Structural Insights into Human Peroxisome Proliferator Activated Receptor Delta (PPAR-Delta) Selective Ligand Binding. Plos One (2012)

Release Date

2012-07-04

Peptides

Peroxisome proliferator-activated receptor delta: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Peroxisome proliferator-activated receptor delta

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