SMTL ID : 3tks.1

Crystal structure of full-length human peroxiredoxin 4 in three different redox states

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-10-mer

Ligands

6 x PER: PEROXIDE ION(Non-covalent)

PER.1: 4 residues within 4Å: Chain A: V.98, R.175, L.194 Chain I: V.219 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.175 Water bridges: A:V.98 PER.2: 6 residues within 4Å: Chain C: T.96, F.97, V.98, C.99, R.175, L.194 6 PLIP interactions: 6 interactions with chain C Hydrogen bonds: C:F.97, C:V.98, C:R.175, C:L.194 Water bridges: C:T.96, C:T.96 PER.3: 6 residues within 4Å: Chain D: T.96, F.97, V.98, C.99, R.175, L.194 6 PLIP interactions: 6 interactions with chain D Hydrogen bonds: D:F.97, D:V.98, D:R.175, D:L.194 Water bridges: D:T.96, D:T.96 PER.4: 4 residues within 4Å: Chain D: V.219 Chain F: V.98, R.175, L.194 3 PLIP interactions: 3 interactions with chain F Hydrogen bonds: F:R.175 Water bridges: F:T.96, F:V.98 PER.5: 6 residues within 4Å: Chain H: T.96, F.97, V.98, C.99, R.175, L.194 5 PLIP interactions: 5 interactions with chain H Hydrogen bonds: H:T.96, H:T.96, H:F.97, H:V.98, H:R.175 PER.6: 6 residues within 4Å: Chain I: T.96, F.97, V.98, C.99, R.175, L.194 5 PLIP interactions: 5 interactions with chain I Hydrogen bonds: I:T.96, I:T.96, I:F.97, I:V.98, I:R.175

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, X. et al., Structural insights into the peroxidase activity and inactivation of human peroxiredoxin 4. Biochem.J. (2011)

Release Date

2011-10-05

Peptides

Peroxiredoxin-4: ABCDEFGHIJ

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
A

G
B

H
C

I
D

J
E

Peroxiredoxin-4

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