SMTL ID : 3tky.2 (1 other biounit)

Monolignol o-methyltransferase (momt)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.47 Å

Oligo State

homo-dimer

Ligands

2 x N7I: 4-[(1E)-3-hydroxyprop-1-en-1-yl]-2-methoxyphenol(Non-covalent)

N7I.1: 15 residues within 4Å: Chain A: F.130, A.134, L.139, I.165, F.166, F.179, M.183, W.269, H.272, D.273, L.322, M.323, Y.326, N.327 Ligands: SAH.2 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:F.130, A:F.179, A:W.269, A:W.269 Hydrogen bonds: A:W.269, A:N.327 N7I.3: 13 residues within 4Å: Chain A: M.26 Chain B: F.130, L.133, L.139, I.165, F.179, M.183, W.269, T.319, L.322, M.323, Y.326, N.327 4 PLIP interactions: 4 interactions with chain B Hydrophobic interactions: B:F.130, B:L.133, B:L.139, B:L.322

2 x SAH: S-ADENOSYL-L-HOMOCYSTEINE(Non-covalent)

SAH.2: 19 residues within 4Å: Chain A: F.166, F.179, M.183, S.187, D.209, G.211, G.212, G.213, D.234, L.235, V.238, G.253, D.254, M.255, F.256, K.268, W.269, I.270 Ligands: N7I.1 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:M.183, A:S.187, A:G.213, A:L.235, A:D.254, A:M.255, A:K.268 Water bridges: A:K.268, A:K.268 pi-Stacking: A:F.166 SAH.4: 18 residues within 4Å: Chain B: F.166, F.179, M.183, S.187, G.211, G.212, G.213, D.234, L.235, V.238, G.253, D.254, M.255, F.256, K.268, I.270, D.273, W.274 11 PLIP interactions: 11 interactions with chain B Hydrophobic interactions: B:M.183 Hydrogen bonds: B:S.187, B:S.187, B:L.235, B:D.254, B:D.254, B:M.255, B:K.268, B:K.268 Water bridges: B:S.187 pi-Stacking: B:F.166

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, K. et al., An engineered monolignol 4-o-methyltransferase depresses lignin biosynthesis and confers novel metabolic capability in Arabidopsis. Plant Cell (2012)

Release Date

2012-08-29

Peptides

(Iso)eugenol O-methyltransferase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

(Iso)eugenol O-methyltransferase

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