SMTL ID : 3tle.1

Microcin C7 self immunity protein MccF in complex with glutamyl sulfamoyl adenylate

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.30 Å

Oligo State

homo-dimer

Ligands

2 x GSU: O5'-(L-GLUTAMYL-SULFAMOYL)-ADENOSINE(Non-covalent)

GSU.1: 16 residues within 4Å: Chain A: I.117, G.118, G.119, Y.144, S.145, D.146, S.210, W.213, N.245, N.247, T.248, S.272, R.273, K.274, E.304, H.338 16 PLIP interactions: 16 interactions with chain A Hydrogen bonds: A:G.118, A:G.119, A:S.145, A:D.146, A:N.247, A:R.273, A:H.338, A:H.338 Water bridges: A:G.119, A:N.245, A:S.272, A:K.274 Salt bridges: A:K.274 pi-Stacking: A:W.213, A:W.213, A:W.213 GSU.2: 17 residues within 4Å: Chain B: I.117, G.118, G.119, Y.144, S.145, D.146, P.170, S.210, W.213, N.245, N.247, T.248, S.272, R.273, K.274, E.304, H.338 19 PLIP interactions: 19 interactions with chain B Hydrogen bonds: B:G.118, B:G.119, B:S.145, B:D.146, B:N.247, B:R.273, B:H.338 Water bridges: B:G.119, B:Y.144, B:Y.144, B:N.245, B:N.245, B:S.272, B:K.274, B:E.304 Salt bridges: B:K.274 pi-Stacking: B:W.213, B:W.213, B:W.213

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 6 residues within 4Å: Chain B: I.269, E.270, D.271, G.301, H.303, P.315 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:D.271

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Agarwal, V. et al., Structure and function of a serine carboxypeptidase adapted for degradation of the protein synthesis antibiotic microcin C7. Proc.Natl.Acad.Sci.USA (2012)

Release Date

2012-02-29

Peptides

MccF: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

MccF

Related Entries With Identical Sequence