SMTL ID : 3tnn.3 (3 other biounits)

Crystal structure of N5-i5 Fab, an ADCC mediating and non-neutralizing CD4i anti-HIV- 1 antibody.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

hetero-1-1-mer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain B: D.156, S.157, S.158, R.194 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:S.157, B:S.158 Water bridges: B:S.157, B:S.157 Salt bridges: B:R.194 SO4.2: 4 residues within 4Å: Chain B: S.61, R.63, Q.81, E.83 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:S.61, B:Q.81 Water bridges: B:S.61 Salt bridges: B:R.63

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 2 residues within 4Å: Chain B: K.161, A.162 Ligand excluded by PLIP CL.4: 1 residues within 4Å: Chain B: S.127 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Guan, J. et al., Crystal structure of N5-i5 Fab, an ADCC and non-neutralizing anti-HIV-1 antibody. To be Published

Release Date

2012-09-26

Peptides

Fab heavy chain of ADCC and non-neutralizing anti-HIV-1 antibody N5-i5: A
Fab light chain of ADCC and non-neutralizing anti-HIV-1 antibody N5-i5: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Fab heavy chain of ADCC and non-neutralizing anti-HIV-1 antibody N5-i5

Fab light chain of ADCC and non-neutralizing anti-HIV-1 antibody N5-i5

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