SMTL ID : 3tqh.1

Structure of the quinone oxidoreductase from Coxiella burnetii

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.44 Å

Oligo State

monomer

Ligands

1 x NDP: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NDP.1: 26 residues within 4Å: Chain A: P.47, K.51, T.136, T.140, A.160, A.162, G.163, G.164, V.165, T.183, A.184, S.185, N.188, Y.203, L.222, V.223, V.244, P.245, T.246, L.266, L.267, K.268, G.310, H.311, V.312 Ligands: SO4.2 23 PLIP interactions: 23 interactions with chain A Hydrophobic interactions: A:T.136, A:T.140, A:V.244 Hydrogen bonds: A:I.48, A:K.51, A:A.160, A:G.164, A:V.165, A:S.185, A:N.188, A:Y.203, A:Y.203, A:V.244, A:K.268, A:V.312 Water bridges: A:N.46, A:N.46, A:K.51, A:A.162, A:G.163, A:G.166 Salt bridges: A:H.311 pi-Stacking: A:Y.203

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 6 residues within 4Å: Chain A: I.48, K.51, V.244, P.245, T.246 Ligands: NDP.1 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:T.246 Water bridges: A:I.48, A:I.247, A:I.247 Salt bridges: A:K.51 SO4.3: 3 residues within 4Å: Chain A: S.127, F.128, L.129 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:F.128, A:L.129 Salt bridges: A:K.319

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Franklin, M.C. et al., Structural genomics for drug design against the pathogen Coxiella burnetii. Proteins (2015)

Release Date

2011-09-28

Peptides

Quinone oxidoreductase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Quinone oxidoreductase