SMTL ID : 3trc.1

Structure of the GAF domain from a phosphoenolpyruvate-protein phosphotransferase (ptsP) from Coxiella burnetii

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

homo-dimer

Ligands

2 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 7 residues within 4Å: Chain A: G.78, L.79, I.80, A.100, Y.101, K.102, R.104 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:L.79, A:I.80, A:K.102 Water bridges: A:R.104, A:R.104, A:R.104 Salt bridges: A:R.104 PO4.3: 7 residues within 4Å: Chain B: G.78, L.79, I.80, A.100, Y.101, K.102, R.104 8 PLIP interactions: 8 interactions with chain B Hydrogen bonds: B:L.79, B:I.80, B:K.102 Water bridges: B:Y.101, B:R.104, B:R.104, B:R.104 Salt bridges: B:R.104

2 x NA: SODIUM ION(Non-functional Binders)

NA.2: 5 residues within 4Å: Chain A: Y.55, F.75, G.76, G.81, E.85 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.55, A:G.76 NA.4: 5 residues within 4Å: Chain B: Y.55, F.75, G.76, G.81, E.85 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:Y.55, B:G.76, B:G.81, B:E.85

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Franklin, M.C. et al., Structural genomics for drug design against the pathogen Coxiella burnetii. Proteins (2015)

Release Date

2011-09-28

Peptides

Phosphoenolpyruvate-protein phosphotransferase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Phosphoenolpyruvate-protein phosphotransferase