SMTL ID : 3trd.1

Structure of an alpha-beta serine hydrolase homologue from Coxiella burnetii

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

2 x ACT: ACETATE ION(Non-functional Binders)

ACT.1: 6 residues within 4Å: Chain A: H.40, S.113, F.139, Y.140, V.163 Ligands: NA.3 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:V.163 Hydrogen bonds: A:S.113, A:F.114, A:Y.140 Salt bridges: A:H.40 ACT.2: 2 residues within 4Å: Chain A: T.46, N.48 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:T.46, A:N.48

2 x NA: SODIUM ION(Non-functional Binders)

NA.3: 5 residues within 4Å: Chain A: P.39, H.40, S.113, F.114 Ligands: ACT.1 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:H.40, A:S.113, A:F.114 NA.4: 3 residues within 4Å: Chain A: G.73, G.75, S.77 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:G.73 Water bridges: A:G.75

2 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.5: 2 residues within 4Å: Chain A: N.49, K.50 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:N.49, A:K.50 Water bridges: A:N.49, A:K.50, A:K.50 Salt bridges: A:K.50 PO4.6: 5 residues within 4Å: Chain A: S.1, R.24, E.29, K.65, W.102 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:S.1, A:W.102, A:W.102 Salt bridges: A:R.24, A:K.65

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Franklin, M.C. et al., Structural genomics for drug design against the pathogen Coxiella burnetii. Proteins (2015)

Release Date

2011-09-21

Peptides

Alpha/beta hydrolase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Alpha/beta hydrolase