SMTL ID : 3tsm.1

Crystal structure of Indole-3-glycerol phosphate synthase from Brucella melitensis

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.15 Å

Oligo State

homo-dimer

Ligands

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 7 residues within 4Å: Chain A: R.125, D.127, Q.134, E.137 Chain B: K.17, E.20, A.24 6 PLIP interactions: 5 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:R.125, A:R.125, A:D.127, A:Q.134, A:E.137 Water bridges: B:K.17 GOL.2: 8 residues within 4Å: Chain A: K.17, E.20, I.21, A.24 Chain B: R.125, D.127, Q.134, E.137 5 PLIP interactions: 4 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:R.125, B:R.125, B:D.127, B:Q.134 Water bridges: A:K.17 GOL.5: 4 residues within 4Å: Chain B: G.57, F.59, L.236, E.239 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:F.59 Water bridges: B:G.57, B:E.239, B:E.239

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 6 residues within 4Å: Chain B: K.66, R.198, S.227, I.248, G.249, E.250 10 PLIP interactions: 10 interactions with chain B Hydrogen bonds: B:G.249, B:E.250 Water bridges: B:K.66, B:K.66, B:R.198, B:S.227, B:S.227, B:S.251 Salt bridges: B:K.66, B:R.198

1 x UNL: UNKNOWN LIGAND

UNL.4: 7 residues within 4Å: Chain A: I.9 Chain B: S.69, P.70, S.71, F.105, R.198, L.200 5 PLIP interactions: 1 interactions with chain A, 4 interactions with chain B Hydrophobic interactions: A:I.9, B:P.70, B:F.105, B:L.200 Hydrogen bonds: B:S.71

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gardberg, A. et al., Crystal structure of Indole-3-glycerol phosphate synthase from Brucella melitensis. To be Published

Release Date

2011-10-05

Peptides

Indole-3-glycerol phosphate synthase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Indole-3-glycerol phosphate synthase