SMTL ID : 3tt2.1

Crystal Structure of GCN5-related N-Acetyltransferase from Sphaerobacter thermophilus

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.73 Å

Oligo State

monomer

Ligands

6 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 6 residues within 4Å: Chain A: V.254, R.259, G.260, G.262, I.263, A.264 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:G.260, A:G.262, A:I.263, A:A.264 Water bridges: A:R.261, A:R.261 SO4.6: 4 residues within 4Å: Chain A: R.132, S.134, H.308, R.309 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:A.133, A:S.134, A:R.309 Salt bridges: A:R.132 SO4.7: 2 residues within 4Å: Chain A: N.79, R.81 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.79, A:R.81 SO4.8: 8 residues within 4Å: Chain A: G.97, M.98, G.99, L.100, G.101, T.102, L.141 Ligands: MES.12 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:G.97, A:G.97, A:G.99, A:L.100, A:G.101, A:T.102, A:T.102, A:T.102 SO4.9: 2 residues within 4Å: Chain A: D.51 Ligands: GOL.5 No protein-ligand interaction detected (PLIP) SO4.10: 2 residues within 4Å: Chain A: Q.144, H.145 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.144 Salt bridges: A:H.145

5 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 3 residues within 4Å: Chain A: V.179, P.180, G.181 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:P.180 GOL.3: 1 residues within 4Å: Chain A: R.297 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.297 GOL.4: 2 residues within 4Å: Chain A: R.297, R.301 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.297, A:R.301 GOL.5: 5 residues within 4Å: Chain A: Y.88, Y.130, I.153, Y.310 Ligands: SO4.9 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.88, A:Y.88 GOL.13: 3 residues within 4Å: Chain A: G.58, A.61, W.107 No protein-ligand interaction detected (PLIP)

2 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)

MES.11: 4 residues within 4Å: Chain A: K.218, D.219, E.242, R.278 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.219 Salt bridges: A:D.219 MES.12: 10 residues within 4Å: Chain A: G.89, Y.90, V.91, R.96, G.101, H.129, S.137, A.138, L.141 Ligands: SO4.8 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:G.89, A:S.137, A:S.137, A:S.137 Salt bridges: A:R.96

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kim, Y. et al., Crystal Structure of GCN5-related N-Acetyltransferase from Sphaerobacter thermophilus. To be Published

Release Date

2011-10-05

Peptides

GCN5-related N-acetyltransferase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

GCN5-related N-acetyltransferase