SMTL ID : 3tub.1

Crystal structure of SYK kinase domain with 1-(5-(6,7-dimethoxyquinolin-4-yloxy)pyridin-2-yl)-3-((1R,2S)-2-phenylcyclopropyl)urea

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.23 Å

Oligo State

monomer

Ligands

1 x FPU: 1-{5-[(6,7-dimethoxyquinolin-4-yl)oxy]pyridin-2-yl}-3-[(1R,2S)-2-phenylcyclopropyl]urea(Non-covalent)

FPU.1: 26 residues within 4Å: Chain A: L.35, G.36, V.43, A.58, K.60, E.78, V.81, M.82, L.85, I.90, V.91, M.106, E.107, M.108, A.109, E.110, G.112, L.143, F.148, H.150, L.159, I.168, S.169, D.170, F.171, L.173 18 PLIP interactions: 18 interactions with chain A Hydrophobic interactions: A:V.43, A:V.43, A:A.58, A:K.60, A:L.85, A:I.90, A:L.143, A:F.148, A:L.159, A:I.168, A:D.170, A:F.171, A:L.173 Hydrogen bonds: A:E.78, A:E.78, A:E.78, A:A.109, A:D.170

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lovering, F. et al., Identification of Type-II Inhibitors Using Kinase Structures. Chem.Biol.Drug Des. (2012)

Release Date

2012-08-29

Peptides

Tyrosine-protein kinase SYK: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Tyrosine-protein kinase SYK