SMTL ID : 3txn.1

Crystal structure of Rpn6 from Drosophila melanogaster, native data

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 6 residues within 4Å: Chain A: T.221, Y.225, E.287, D.288, V.289, I.290 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Y.225, A:E.287, A:V.289 Water bridges: A:T.221 GOL.2: 7 residues within 4Å: Chain A: I.311, E.312, Y.314, S.315, V.359, F.360, E.361 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.312, A:Y.314, A:E.362

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 2 residues within 4Å: Chain A: S.53, K.54 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.54 Salt bridges: A:K.54 SO4.4: 3 residues within 4Å: Chain A: S.270, A.272, R.309 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.270 Water bridges: A:A.272, A:N.306 Salt bridges: A:R.309

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pathare, G.R. et al., The proteasomal subunit Rpn6 is a molecular clamp holding the core and regulatory subcomplexes together. Proc.Natl.Acad.Sci.USA (2012)

Release Date

2011-12-14

Peptides

26S proteasome regulatory complex subunit p42B: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

26S proteasome regulatory complex subunit p42B

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