SMTL ID : 3ty7.1

Crystal Structure of Aldehyde Dehydrogenase family Protein from Staphylococcus aureus

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-dimer

Ligands

7 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 5 residues within 4Å: Chain A: M.235, K.244, V.245 Chain B: M.235, V.245 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:V.245, A:V.245 GOL.2: 4 residues within 4Å: Chain A: D.6, T.8, K.9, E.18 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:T.8, A:K.9 GOL.3: 3 residues within 4Å: Chain A: Y.7, W.16, E.187 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.187, A:E.187 GOL.5: 3 residues within 4Å: Chain B: G.14, E.15, D.190 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:E.15, B:D.190 GOL.6: 3 residues within 4Å: Chain B: D.6, T.8, E.18 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:T.8, B:E.18 GOL.7: 5 residues within 4Å: Chain B: Y.7, K.9, W.16, V.183, E.187 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:Y.7, B:E.187 Water bridges: B:K.9 GOL.9: 2 residues within 4Å: Chain B: R.83, D.86 2 PLIP interactions: 2 interactions with chain B Water bridges: B:E.187, B:E.187

2 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.4: 3 residues within 4Å: Chain A: K.44, A.45, D.48 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.48 Water bridges: A:K.44 PEG.10: 4 residues within 4Å: Chain B: N.43, K.44, A.45, D.48 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:K.44, B:A.45

1 x MG: MAGNESIUM ION(Non-covalent)

MG.8: 4 residues within 4Å: Chain B: I.28, E.94, E.177, I.325 4 PLIP interactions: 3 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:I.28, B:E.94, B:E.177, H2O.144

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kim, Y. et al., Crystal Structure of Aldehyde Dehydrogenase family Protein from Staphylococcus aureus. To be Published

Release Date

2011-10-19

Peptides

Putative aldehyde dehydrogenase SAV2122: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Putative aldehyde dehydrogenase SAV2122