SMTL ID : 3u1r.1

Structure Analysis of A New Psychrophilic Marine Protease

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: H.186, H.190, H.196, Y.226 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.186, A:H.190, A:H.196, A:Y.226, H2O.1

8 x CA: CALCIUM ION(Non-covalent)

CA.2: 6 residues within 4Å: Chain A: D.66, N.68, D.70, V.72, N.74, D.131 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:D.66, A:D.70, A:V.72, A:D.131 CA.3: 6 residues within 4Å: Chain A: R.267, G.269, T.271, D.299, G.301, D.304 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:R.267, A:G.269, A:T.271, A:D.299, A:D.304 CA.4: 4 residues within 4Å: Chain A: G.302, D.304, T.341, E.343 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:G.302, A:T.341, A:E.343, H2O.1, H2O.1 CA.5: 7 residues within 4Å: Chain A: G.348, G.350, D.352, G.365, G.366, A.367, D.370 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:G.348, A:G.350, A:D.352, A:G.365, A:D.370 CA.6: 8 residues within 4Å: Chain A: G.366, A.367, G.368, D.370, G.383, G.384, S.385, D.388 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:G.366, A:G.368, A:D.370, A:G.383, A:D.388 CA.7: 7 residues within 4Å: Chain A: N.357, A.359, N.361, G.374, G.375, G.376, D.379 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:N.357, A:A.359, A:G.374, A:G.376, A:D.379 CA.8: 6 residues within 4Å: Chain A: G.375, G.376, G.377, D.379, D.397, D.404 6 PLIP interactions: 5 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:G.375, A:G.377, A:D.379, A:D.397, A:D.404, H2O.5 CA.9: 5 residues within 4Å: Chain A: G.384, G.386, D.388, Q.410, D.414 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:G.384, A:G.386, A:D.388, A:D.414, H2O.1

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, S.C. et al., Structure analysis of a new psychrophilic marine protease. Plos One (2011)

Release Date

2012-10-31

Peptides

Alkaline metalloprotease: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Alkaline metalloprotease