- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x FBP: 1,6-di-O-phosphono-beta-D-fructofuranose(Non-covalent)
- 21 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)
UNX.2: 6 residues within 4Å:- Chain A: N.77, S.79, D.115, T.116, S.245, K.272
Ligand excluded by PLIPUNX.3: 2 residues within 4Å:- Chain A: D.238, R.463
Ligand excluded by PLIPUNX.4: 3 residues within 4Å:- Chain A: K.272, E.274, D.298
Ligand excluded by PLIPUNX.5: 6 residues within 4Å:- Chain A: R.296, Q.312, D.349, N.352, A.353
- Chain B: S.348
Ligand excluded by PLIPUNX.6: 1 residues within 4Å:- Chain A: R.280
Ligand excluded by PLIPUNX.7: 3 residues within 4Å:- Chain A: N.212, L.213, E.302
Ligand excluded by PLIPUNX.10: 2 residues within 4Å:- Chain B: E.274, D.298
Ligand excluded by PLIPUNX.11: 4 residues within 4Å:- Chain B: A.295, G.297, D.298, T.330
Ligand excluded by PLIPUNX.12: 7 residues within 4Å:- Chain B: M.336, I.337, E.366, G.370, D.371, Y.372, P.373
Ligand excluded by PLIPUNX.13: 3 residues within 4Å:- Chain B: P.55, R.58, Y.85
Ligand excluded by PLIPUNX.14: 6 residues within 4Å:- Chain B: L.213, P.214, G.215, N.275, H.276, E.302
Ligand excluded by PLIPUNX.17: 3 residues within 4Å:- Chain C: A.87, I.90, Q.237
Ligand excluded by PLIPUNX.18: 6 residues within 4Å:- Chain C: N.77, S.79, D.115, T.116, S.245, K.272
Ligand excluded by PLIPUNX.19: 4 residues within 4Å:- Chain C: F.246, K.272, E.274, D.298
Ligand excluded by PLIPUNX.20: 5 residues within 4Å:- Chain C: A.295, R.296, G.297, D.298, T.330
Ligand excluded by PLIPUNX.22: 5 residues within 4Å:- Chain D: N.46, H.466, Y.468, G.470, I.471
Ligand excluded by PLIPUNX.23: 4 residues within 4Å:- Chain D: A.295, G.297, D.298, T.330
Ligand excluded by PLIPUNX.24: 2 residues within 4Å:- Chain D: E.274, D.298
Ligand excluded by PLIPUNX.25: 7 residues within 4Å:- Chain D: M.336, I.337, E.366, G.370, D.371, Y.372, P.373
Ligand excluded by PLIPUNX.26: 6 residues within 4Å:- Chain D: T.97, E.98, Y.107, P.109, V.110, R.463
Ligand excluded by PLIPUNX.27: 3 residues within 4Å:- Chain D: G.215, H.276, E.277
Ligand excluded by PLIP- 2 x 07T: 6-(3-aminobenzyl)-4-methyl-2-methylsulfinyl-4,6-dihydro-5H-thieno[2',3':4,5]pyrrolo[2,3-d]pyridazin-5-one(Non-covalent)
07T.8: 12 residues within 4Å:- Chain A: F.28, L.29, M.32, Y.392, Q.395, L.396
- Chain B: F.28, D.356, Y.392, Q.395, L.396, E.399
10 PLIP interactions:5 interactions with chain A, 5 interactions with chain B- Hydrophobic interactions: A:L.29, B:L.396, B:L.396
- Water bridges: A:Y.392
- pi-Stacking: A:F.28, A:F.28, A:F.28, B:F.28, B:F.28
- Hydrogen bonds: B:L.355
07T.16: 13 residues within 4Å:- Chain C: F.28, L.29, M.32, I.391, Y.392, Q.395, L.396
- Chain D: F.28, D.356, Y.392, Q.395, L.396, E.399
10 PLIP interactions:4 interactions with chain D, 6 interactions with chain C- Hydrophobic interactions: D:L.396, C:F.28, C:L.29
- Hydrogen bonds: D:D.356
- pi-Stacking: D:F.28, D:F.28, C:F.28, C:F.28, C:F.28
- Water bridges: C:Y.392
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Anastasiou, D. et al., Pyruvate kinase M2 activators promote tetramer formation and suppress tumorigenesis. Nat.Chem.Biol. (2012)
- Release Date
- 2012-09-12
- Peptides
- Pyruvate kinase isozymes M1/M2: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x FBP: 1,6-di-O-phosphono-beta-D-fructofuranose(Non-covalent)
- 21 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)
- 2 x 07T: 6-(3-aminobenzyl)-4-methyl-2-methylsulfinyl-4,6-dihydro-5H-thieno[2',3':4,5]pyrrolo[2,3-d]pyridazin-5-one(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Anastasiou, D. et al., Pyruvate kinase M2 activators promote tetramer formation and suppress tumorigenesis. Nat.Chem.Biol. (2012)
- Release Date
- 2012-09-12
- Peptides
- Pyruvate kinase isozymes M1/M2: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D