SMTL ID : 3u31.1

Plasmodium falciparum Sir2A preferentially hydrolyzes medium and long chain fatty acyl lysine

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

hetero-1-1-mer

Ligands

1 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)

NAD.1: 21 residues within 4Å: Chain A: G.53, S.54, G.55, A.58, E.59, S.64, R.66, Q.131, F.198, G.224, T.225, S.226, T.228, V.229, N.250, I.251, A.267, K.268, F.269 Chain B: X.6, T.8 20 PLIP interactions: 19 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:S.54, A:S.54, A:S.54, A:G.55, A:E.59, A:S.64, A:R.66, A:R.66, A:T.225, A:T.225, A:S.226, A:S.227, A:N.250, A:I.251, A:F.269 Water bridges: A:Q.131, A:S.226, A:T.228, A:T.228 Hydrophobic interactions: B:T.8

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 7 residues within 4Å: Chain A: S.54, I.62, R.66, Q.131, N.132, V.133, D.134 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:R.66, A:R.66, A:Q.131, A:V.133, A:D.134, A:D.134

1 x ZN: ZINC ION(Non-covalent)

ZN.3: 4 residues within 4Å: Chain A: C.157, C.160, C.185, C.187 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.157, A:C.160, A:C.185, A:C.187

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhu, A.Y. et al., Plasmodium falciparum Sir2A Preferentially Hydrolyzes Medium and Long Chain Fatty Acyl Lysine. Acs Chem.Biol. (2011)

Release Date

2011-11-09

Peptides

Transcriptional regulatory protein sir2 homologue: A
histone 3 myristoyl lysine 9 peptide: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Transcriptional regulatory protein sir2 homologue

histone 3 myristoyl lysine 9 peptide

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