SMTL ID : 3u6u.1

Crystal structure of the putative acetylglutamate kinase from thermus thermophilus

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.92 Å

Oligo State

homo-dimer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 7 residues within 4Å: Chain A: K.5, G.8, G.36, G.37, S.38, Y.78 Ligands: SO4.2 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:G.8, A:G.37, A:S.38, A:S.38, A:Y.78, A:Y.78 Water bridges: A:K.5, A:K.5, A:G.171, A:D.172 Salt bridges: A:K.5 SO4.2: 5 residues within 4Å: Chain A: G.7, G.8, A.9, S.191 Ligands: SO4.1 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.8, A:A.9, A:S.191, A:S.191 SO4.3: 7 residues within 4Å: Chain B: K.5, G.8, G.36, G.37, S.38, Y.78 Ligands: SO4.4 11 PLIP interactions: 11 interactions with chain B Hydrogen bonds: B:G.8, B:G.37, B:S.38, B:S.38, B:Y.78 Water bridges: B:K.5, B:K.5, B:Y.78, B:D.170, B:D.172 Salt bridges: B:K.5 SO4.4: 5 residues within 4Å: Chain B: G.7, G.8, A.9, S.191 Ligands: SO4.3 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:G.8, B:A.9, B:S.191, B:S.191 Water bridges: B:R.227

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ramya, S. et al., The structure of first dimeric archaeal N-acetyl glutamate kinase reveals an intermediate conformation of the enzyme in the catalytic cycle. To be Published

Release Date

2011-11-16

Peptides

Putative acetylglutamate kinase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

Putative acetylglutamate kinase