SMTL ID : 3uaj.1

Crystal structure of the envelope glycoprotein ectodomain from dengue virus serotype 4 in complex with the fab fragment of the chimpanzee monoclonal antibody 5H2

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.23 Å

Oligo State

hetero-2-2-2-mer

Ligands

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 1 residues within 4Å: Chain A: N.67 No protein-ligand interaction detected (PLIP) NAG.2: 2 residues within 4Å: Chain D: N.67, Y.90 1 PLIP interactions: 1 interactions with chain D Hydrogen bonds: D:N.67

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cockburn, J.J. et al., Structural insights into the neutralization mechanism of a higher primate antibody against dengue virus. Embo J. (2012)

Release Date

2011-12-14

Peptides

envelope protein: AD
Heavy chain, monoclonal antibody 5H2: BE
Light chain, monoclonal antibody 5H2: CF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

D
A

B
H

E
C

C
L

F
D

envelope protein

Heavy chain, monoclonal antibody 5H2

Light chain, monoclonal antibody 5H2

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