SMTL ID : 3ubh.1

Crystal structure of Drosophila N-cadherin EC1-4

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

monomer

Ligands

6 x CA: CALCIUM ION(Non-covalent)

CA.1: 5 residues within 4Å: Chain A: E.18, D.64, E.66, D.106, E.107 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:E.18, A:D.64, A:E.66, A:D.106, A:E.107 CA.2: 6 residues within 4Å: Chain A: E.18, E.66, D.103, V.104, D.106, D.141 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:E.18, A:E.66, A:D.103, A:V.104, A:D.141 CA.3: 6 residues within 4Å: Chain A: N.105, E.107, D.139, D.141, D.190, Q.201 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:E.107, A:D.139, A:D.139, A:D.141, A:D.190 CA.4: 4 residues within 4Å: Chain A: E.230, D.281, E.283, D.319 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:E.230, A:D.281, A:E.283, A:D.319 CA.5: 6 residues within 4Å: Chain A: E.230, E.283, D.316, V.317, D.319, D.353 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:E.230, A:E.283, A:D.316, A:V.317, A:D.353 CA.6: 6 residues within 4Å: Chain A: N.318, N.320, D.351, D.353, N.357, D.400 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:N.320, A:D.351, A:D.353, A:N.357, A:D.400

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jin, X. et al., Crystal structures of Drosophila N-cadherin ectodomain regions reveal a widely used class of Ca2+-free interdomain linkers. Proc.Natl.Acad.Sci.USA (2012)

Release Date

2011-12-21

Peptides

Neural-cadherin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Neural-cadherin