SMTL ID : 3uc1.1

Mycobacterium tuberculosis gyrase type IIA topoisomerase C-terminal domain

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

monomer

Ligands

1 x CA: CALCIUM ION(Non-covalent)

CA.1: 2 residues within 4Å: Chain A: V.272 Ligands: ACT.2 3 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions, 1 Ligand-Ligand interactions Metal complexes: A:V.272, H2O.1, ACT.2

2 x ACT: ACETATE ION(Non-functional Binders)

ACT.2: 5 residues within 4Å: Chain A: G.37, L.38, V.272, R.274 Ligands: CA.1 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:L.38, A:R.274 Hydrogen bonds: A:L.38 ACT.3: 4 residues within 4Å: Chain A: K.39, G.269, G.270, G.271 3 PLIP interactions: 3 interactions with chain A Water bridges: A:V.272, A:V.272 Salt bridges: A:K.39

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.4: 4 residues within 4Å: Chain A: Q.26, S.77, R.78, T.79 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Q.26, A:R.78, A:T.79, A:T.79

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tretter, E.M. et al., Mechanisms for Defining Supercoiling Set Point of DNA Gyrase Orthologs: II. THE SHAPE OF THE GyrA SUBUNIT C-TERMINAL DOMAIN (CTD) IS NOT A SOLE DETERMINANT FOR CONTROLLING SUPERCOILING EFFICIENCY. J.Biol.Chem. (2012)

Release Date

2012-03-28

Peptides

DNA gyrase subunit A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

DNA gyrase subunit A