SMTL ID : 3uel.3 (2 other biounits)

Crystal structure of the catalytic domain of rat poly (ADP-ribose) glycohydrolase bound to ADP-HPD

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

monomer

Ligands

1 x A1R: 5'-O-[(S)-{[(S)-{[(2R,3R,4S)-3,4-DIHYDROXYPYRROLIDIN-2-YL]METHOXY}(HYDROXY)PHOSPHORYL]OXY}(HYDROXY)PHOSPHORYL]ADENOSINE(Non-covalent)

A1R.1: 18 residues within 4Å: Chain A: I.338, E.339, F.350, A.351, N.352, G.357, V.365, Q.366, E.367, E.368, Y.407, N.481, G.483, C.484, G.485, A.486, F.487, F.514 16 PLIP interactions: 16 interactions with chain A Hydrogen bonds: A:I.338, A:E.339, A:N.352, A:N.352, A:Q.366, A:E.367, A:E.368, A:Y.404, A:Y.407, A:Y.407, A:N.481, A:G.483, A:G.483, A:G.485, A:A.486, A:F.487

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kim, I.K. et al., Structure of mammalian poly(ADP-ribose) glycohydrolase reveals a flexible tyrosine clasp as a substrate-binding element. Nat.Struct.Mol.Biol. (2012)

Release Date

2012-05-23

Peptides

Poly(ADP-ribose) glycohydrolase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

Poly(ADP-ribose) glycohydrolase

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