SMTL ID : 3ug2.1

Crystal structure of the mutated EGFR kinase domain (G719S/T790M) in complex with gefitinib

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-dimer

Ligands

2 x IRE: Gefitinib(Non-covalent)

IRE.1: 15 residues within 4Å: Chain A: L.30, S.31, V.38, A.55, I.56, K.57, L.100, M.102, Q.103, L.104, M.105, P.106, G.108, D.112, L.156 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:V.38, A:A.55 Hydrogen bonds: A:M.105, A:M.105 Salt bridges: A:D.112 Halogen bonds: A:L.100 IRE.3: 15 residues within 4Å: Chain B: L.30, S.31, V.38, A.55, I.56, K.57, L.100, M.102, Q.103, L.104, M.105, P.106, G.108, D.112, L.156 6 PLIP interactions: 6 interactions with chain B Hydrophobic interactions: B:V.38, B:A.55 Hydrogen bonds: B:M.105, B:M.105 Salt bridges: B:D.112 Halogen bonds: B:L.100

2 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)

MES.2: 6 residues within 4Å: Chain A: R.153, V.188, P.189, I.190, K.191, W.192 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:I.190, A:K.191 MES.4: 6 residues within 4Å: Chain B: R.153, V.188, P.189, I.190, K.191, W.192 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:I.190, B:K.191

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yoshikawa, S. et al., Structural basis for the altered drug sensitivities of non-small cell lung cancer-associated mutants of human epidermal growth factor receptor. Oncogene (2013)

Release Date

2012-03-07

Peptides

Epidermal growth factor receptor: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Epidermal growth factor receptor

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