SMTL ID : 3ugc.1

Structural basis of Jak2 inhibition by the type II inhibtor NVP-BBT594

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.34 Å

Oligo State

monomer

Ligands

1 x 046: 5-{[6-(acetylamino)pyrimidin-4-yl]oxy}-N-{4-[(4-methylpiperazin-1-yl)methyl]-3-(trifluoromethyl)phenyl}-2,3-dihydro-1H-indole-1-carboxamide(Non-covalent)

046.1: 26 residues within 4Å: Chain A: L.18, V.26, A.43, K.45, E.61, I.64, L.65, L.68, I.73, V.74, L.90, M.92, E.93, Y.94, L.95, P.96, G.98, L.130, Y.135, I.136, H.137, L.146, I.155, G.156, D.157, F.158 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:L.18, A:L.18, A:V.26, A:K.45, A:E.61, A:L.65, A:L.90, A:Y.94, A:L.146, A:F.158 Hydrogen bonds: A:E.61, A:E.61, A:L.95, A:L.95, A:D.157 pi-Cation interactions: A:H.137 Halogen bonds: A:I.155

1 x MLI: MALONATE ION(Non-functional Binders)

MLI.2: 2 residues within 4Å: Chain A: S.278, R.280 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:S.278 Water bridges: A:R.280, A:R.280 Salt bridges: A:R.280, A:R.280

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Andraos, R. et al., Modulation of activation-loop phosphorylation by JAK inhibitors is binding mode dependent. Cancer Discov (2012)

Release Date

2012-05-16

Peptides

Tyrosine-protein kinase JAK2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Tyrosine-protein kinase JAK2

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