SMTL ID : 3ugs.1

Crystal structure of a probable undecaprenyl diphosphate synthase (uppS) from Campylobacter jejuni

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.46 Å

Oligo State

homo-dimer

Ligands

2 x FFT: (2Z,6Z)-3,7,11-trimethyldodeca-2,6,10-trien-1-yl dihydrogen phosphate(Non-covalent)

FFT.1: 13 residues within 4Å: Chain A: V.13, M.14, D.15, G.16, F.57, A.58, N.63, I.74, L.78, R.174, R.180, S.182 Chain B: T.222 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:V.13, A:F.57, A:L.78 Hydrogen bonds: A:G.16, A:S.182 Water bridges: A:N.17, A:N.17 Salt bridges: A:R.174, A:R.180 FFT.2: 15 residues within 4Å: Chain A: T.222 Chain B: V.13, M.14, D.15, G.16, F.57, A.58, S.60, N.63, I.74, L.77, L.78, R.174, R.180, S.182 12 PLIP interactions: 12 interactions with chain B Hydrophobic interactions: B:V.13, B:M.14, B:F.57, B:A.58, B:L.77, B:L.78 Hydrogen bonds: B:G.16, B:S.182 Water bridges: B:R.180, B:R.180 Salt bridges: B:R.174, B:R.180

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nocek, B. et al., Crystal structure of a probable undecaprenyl diphosphate synthase (uppS) from Campylobacter jejuni. TO BE PUBLISHED

Release Date

2011-11-30

Peptides

Undecaprenyl pyrophosphate synthase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
A

Undecaprenyl pyrophosphate synthase